Copenhagen, Denmark
Onsite/Online

ESTRO 2022

Session Item

Imaging acquisition and processing
Poster (digital)
Physics
Evaluation of synthetic-CT generated from prostate MRI (0.35T) with a 2D+ Pix2Pix method
Jean-Claude Nunes, France
PO-1611

Abstract

Evaluation of synthetic-CT generated from prostate MRI (0.35T) with a 2D+ Pix2Pix method
Authors:

Jean-Claude Nunes1,1, Smaïn Fettem1, Safaa Tahri1, Lhassa Macke1, Hilda Chourak2, Anaïs Barateau1, Caroline Lafond1, Renaud de Crevoisier1, Igor Bessieres3, Louis Marage3, Oscar Acosta1

1Université de Rennes 1, LTSI (Laboratoire du Traitement du Signal et de l'Image), INSERM UMR 1099, CLCC Eugène Marquis , Rennes, France; 2Université de Rennes 1, LTSI (Laboratoire du Traitement du Signal et de l'Image), INSERM UMR 1099, CLCC Eugène Marquis, Rennes, France; 3Centre Georges-François Leclerc (CGFL), Departement of Medical Physics, Dijon, France

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Purpose or Objective

In the context of MR-only radiotherapy workflow, several deep learning methods (DLMs) have been developed for synthetic-CT (sCT) generation from MR images. The Pix2Pix DLM (a conditional generative adversarial network [cGAN]) can be applied on the 3 MRI views (transverse, sagittal and coronal) and not only on the axial view. The aim of this study was to compare the sCTs resulting from the 2D+ Pix2Pix model (in the 3 views) and the 2D Pix2Pix model (axial view) for prostate MRI-only radiotherapy. 

Material and Methods

Prostate CT and MR images were acquired in treatment position for 39 patients. MR acquisitions, using T2/T1-weighted TrueFISP sequences, were performed with an MRI-linac device (MRIdian, Viewray, 0.35T). 2D+ method consists of generating 3 sCTs (according to each view) per patient, and combined in one sCT by using the median voxel value. sCTs generated by the 2D Pix2Pix model (axial view) were compared to sCTs generated with the 2D+ Pix2Pix model. For both of these methods, the perceptual loss function, a ResNet 9 blocks generator, a PatchGAN discriminator, and Adam optimizer were used. The evaluation was performed on a 5-fold cross validation using 30 patient images for training and 9. Finally, both sCT were compared to the original CT from a voxel-wise comparison with the mean absolute error (MAE) in Hounsfield units (HU), mean absolute percentage error (MAPE) in % , and peak signal to noise ratio (PSNR) in dB. The Wilcoxon test was used to compare the results obtained with the 2D+ model to those obtained with the 2D model. Significant differences were considered for p-value<0.05.

Results

Table 1 presents the results of MAE, MAPE and PSNR for the two methods. For the body and the bones, significantly lower MAE and MAPE results were found with the 2D+ Pix2Pix model, compared to the 2D Pix2Pix model. For the body and the bones, significantly higher PSNR results were found with the 2D+ Pix2Pix model, compared to the 2D Pix2Pix model.
sCTs generated from 2D+ Pix2Pix model were less impacted by inter-slices artefacts (Figure 1) than sCTs generated by 2D Pix2Pix model. 

 

 

MAE (HU)

MAPE (%)

PSNR (dB)

Body

Bones

Body

Bones

Body

Bones

2D Pix2Pix

34.6 ± 7.1

136.8 ± 20.7

1.2 ± 0.3

0.5 ± 0.1

29.8 ± 1.6

18.7 ± 1.2

2D+ Pix2Pix

29.2 ± 5.0*

121.0 ± 20.4*

1.1 ± 0.2*

0.4 ± 0.1*

31.0 ± 1.6*

19.1 ± 1.4*

Table 1: MAE, ME and PSNR (mean ± standard deviation) results in the body and the bones for 39 patients

*Significant differences were considered at p-value<0.05.


Conclusion

In order to generate sCT from prostate MRI, the 2D+ Pix2Pix model allows to generate sCT with less image uncertainties than the 2D Pix2Pix model. The next step will be a dosimetric evaluation of sCTs generated by the 2D+ Pix2Pix model.